Software
Research Paper Associated Software
Zhi-Feng Wei, Pablo Moriano, and Ramakrishnan Kannan, Robustness of graph embedding methods for community detection. https://github.com/zf-wei/Robustness-of-Graph-Embeddings-for-Community-Detection
Yufan Huang, David F. Gleich, Nate Veldt. Densest Subhypergraph. https://github.com/luotuoqingshan/local-DHSG
Charles Colley, Huda Nassar, David F. Gleich. Low-rank tensor matching with Kronecker products.
https://github.com/charlescolley/LambdaTAME.jlMeng Liu, Tamal K. Dey, David F. Gleich. Graph-based topological data analysis.
https://github.com/MengLiuPurdue/Graph-Topological-Data-AnalysisYufan Huang, C. Seshadhri, David F. Gleich. Low-rank SDPs for finding bounds on mu-conductance.
https://github.com/luotuoqingshan/mu-conductance-low-rank-sdpKızılkale et al. Fast intratumor heterogeneity inference from single-cell sequencing data.
HUNTRESS, a fast algorithm for reconstructing phylogenetic trees of tumor evolution: https://github.com/PASSIONLab/HUNTRESS
Bharadwaj et al. Fast Exact Leverage Score Sampling from Khatri-Rao Products with Applications to Tensor Decomposition, https://github.com/vbharadwaj-bk/fast_tensor_leverage
Moyi Tian and Pablo Moriano. Robustness of community structure under edge addition. https://github.com/Moyi-Tian/CommunityRobustness
Large software packages contributed to or/and used by Sparsitute members
Azad, Selvitopi, Buluc, et al. The Combinatorial BLAS. https://github.com/PASSIONLab/CombBLAS
Solomonik et al. Cyclops Tensor Framework. https://github.com/cyclops-community/ctf
Ramakrishnan Kannan, Grey Ballard, Haesun Park et.al., Parallel Low Rank Approximation with Non-negativity Constraints, https://github.com/ramkikannan/planc
Sherry Li et al. SuperLU Sparse Direct Solver. https://portal.nersc.gov/project/sparse/superlu/
Yang Liu et al., ButterflyPACK. https://github.com/liuyangzhuan/ButterflyPACK
Stefan Schnake et al., ASGarD - Adaptive Sparse Grid Discontinuous Galerkin Method, https://github.com/project-asgard/asgard